LeXOncofusion (for RNA) Panel

Catalog Number:
  • #LX01512
  • #LX01511
  • #LX01513

LeXOncoFusion (RNA) Panel: Definitive Fusion Discovery & Transcriptomic Insight

The LeXOncoFu (RNA) Panel is a high-performance targeted enrichment solution engineered for the precise identification and validation of gene fusions in solid tumor research. By operating at the transcript level, this panel provides functional evidence of genomic rearrangements, bridging the gap between DNA-level structural variants and their actual biological impact.

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Product Features

Targeted Precision for Solid Tumors

The panel focuses on 105 high-impact genes curated for their high clinical relevance and frequent involvement in oncogenic fusions. To ensure no critical data is missed, the probe design offers exhaustive coverage across:

  • Transcript Coding Regions (CDS): Complete enrichment of all coding sequences as defined by RefSeq 109.
  • Strategic UTR Coverage: Targeted inclusion of critical Untranslated Regions (UTRs) where fusion breakpoints and regulatory disruptions frequently occur.

Triple-Layer Data Insights in a Single Assay

The LeXOncoFu system enables researchers to extract multidimensional information from a single RNA sample, maximizing data yield from often-limited clinical specimens:

  1. Fusion Detection: Definitively identify known and novel fusion events with their specific partner genes and isoforms.
  2. Expressed Mutation Analysis: Detect single nucleotide variants (SNVs) and indels within active transcripts to assess the functional mutation load.
  3. Gene Expression Profiling: Quantify transcript abundance to identify signature patterns of oncogenic transformation and pathway activation.
Performance

Gene List
ABL1*†ABL2AKT3ALKARHGAP26AXLBCL2BCOR*BRAFBRD3*BRD4*CAMTA1
CCNB3*CCND1CICCOL6A3CSF1RDNAJB1EGFREML4EPC1*ERBB2ERG*ESR1
ETS1ETV1*ETV4ETV5*ETV6*EWSR1FGFR1FGFR2FGFR3FGR*FLI1FLT3
FOSBFOXO1FUSGLI1HMGA2INSRJAK2*JAK3JAZF1KIF5BKITKMT2A
MAML2MAST1MAST2MEAF6MET*MLLT3MSH2MSMBMUSKMYBMYCNCOA1*
NCOA2*NOTCH1NOTCH2NOTCH3NR4A3*NRG1NTRK1NTRK2NTRK3NUMBLNUTM1PAX3
PAX7PDGFBPDGFRAPDGFRBPHF1*PIK3CA*PKN1PLAG1*PPARG*PRKACAPRKCAPRKCB
RAF1RARA*RELARETROS1RSPO2*RSPO3SS18STAT6*TAF15TCF12TCF3
TERTTFE3TFEBTFGTHADATMPRSS2*†TP53*USP6*YWHAE*

*Covers all 5′-UTRs; †Covers all 3′-UTRs。

PackageColor Of Tube CapComponentVolumePackage/Storage
LX01512LeXOncofusion (for RNA) Panel v1.0, 16 rxn70 μL-20
LX01511LeXOncofusion (for RNA) Panel v1.0, 96 rxn415 μL-20
Q1. Why Choose LeXOncoFusion?

While DNA sequencing identifies potential rearrangements, only RNA sequencing can confirm if those rearrangements lead to functional, aberrant transcripts. The LeXOncoFusion (RNA) Panel is the essential tool for researchers seeking to validate driver fusions with high sensitivity, even in samples with low tumor purity or complex genomic backgrounds.

Q2. How does the LeXOncoFusion panel handle rare or novel fusion partners?

Because our probes cover the entire coding sequence and critical UTRs of the 105 target genes, the panel can capture fusions involving both known and novel partner genes. This “anchor-based” approach ensures that if a target gene is rearranged, its partner will be enriched and identified during bioinformatic analysis.

Q3. Is this panel compatible with degraded RNA from FFPE samples?

Yes. The LeXOncoFusion workflow is optimized for the challenges of solid tumor research, including the use of RNA extracted from Formalin-Fixed Paraffin-Embedded (FFPE) tissues. The targeted capture approach significantly improves the signal-to-noise ratio compared to whole-transcriptome methods, providing reliable results from fragmented samples.

ProductCatalog
LeXOncoFusion (for RNA) Panel v1.0, 16 rxnLX01512
LeXOncoFusion (for RNA) Panel v1.0, 96 rxnLX01511
LeXOncoFusion (for RNA) Panel v1.0, 480 rxnLX01513

For inquiries or to request a formal quotation, please contact us at support@lexigenbio.com

Product Sheet

  • 1. Brochure

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